Bioinformatics Engineer – Immune Repertoire & Transcriptomics

Job Summary

We are seeking experienced Bioinformatics Engineers with strong expertise in Immune Repertoire and Transcriptomics data processing to build and deploy scalable cloud-native bioinformatics workflows. The role involves developing production-grade pipelines for TCR/BCR sequencing, single-cell RNA-seq, and Bulk RNA-seq datasets, along with downstream analytics and multi-omics integration.

Key Responsibilities

• Design, develop, and deploy scalable bioinformatics pipelines for:
• TCR/BCR sequencing data
• Single-cell RNA-seq (scRNA-seq)
• Bulk RNA-seq workflows
• Process sequencing datasets from platforms such as 10x Genomics, SMART-seq, Adaptive, and iRepertoire.
• Build workflows for QC, alignment, pseudo-alignment, normalization, clustering, differential expression, clonotype analysis, diversity metrics, antigen/epitope matc...